2023
1 Two-fluid dynamics and micron-thin boundary layers shape cytoplasmic flows in early Drosophila embryos
Claudio Hernández-López, Alberto Puliafito, Yitong Xu, Ziqi Lu, Stefano Di Talia, Massimo Vergassola
Proceedings of the National Academy of Sciences of the United States of America
Claudio Hernández-López, Alberto Puliafito, Yitong Xu, Ziqi Lu, Stefano Di Talia, Massimo Vergassola
Proceedings of the National Academy of Sciences of the United States of America
2 LC3 conjugation to lipid droplets
Mohyeddine Omrane, Thomas Melia, Abdou Rachid Thiam
Autophagy
Mohyeddine Omrane, Thomas Melia, Abdou Rachid Thiam
Autophagy
3 Curvature in Biological Systems: Its Quantification, Emergence, and Implications across the Scales
Barbara Schamberger, Ricardo Ziege, Karine Anselme, Martine Ben Amar, Michał Bykowski, André P G Castro, Amaia Cipitria, Rhoslyn A Coles, Rumiana Dimova, Michaela Eder, Sebastian Ehrig, Luis M Escudero, Myfanwy E Evans, Paulo R Fernandes, Peter Fratzl, Liesbet Geris, Notburga Gierlinger, Edouard Hannezo, Aleš Iglič, Jacob J K Kirkensgaard, Philip Kollmannsberger, Łucja Kowalewska, Ioannis Papantoniou, Laurent Pieuchot, Tiago H V Pires, Lars D Renner, Andrew O Sageman‐furnas, Gerd E Schröder‐turk, Anupam Sengupta, Vikas R Sharma, Antonio Tagua, Caterina Tomba, Xavier Trepat, Sarah L Waters, Edwina F Yeo, Andreas Roschger, Cécile M Bidan, John W C Dunlop
Advanced Materials
Barbara Schamberger, Ricardo Ziege, Karine Anselme, Martine Ben Amar, Michał Bykowski, André P G Castro, Amaia Cipitria, Rhoslyn A Coles, Rumiana Dimova, Michaela Eder, Sebastian Ehrig, Luis M Escudero, Myfanwy E Evans, Paulo R Fernandes, Peter Fratzl, Liesbet Geris, Notburga Gierlinger, Edouard Hannezo, Aleš Iglič, Jacob J K Kirkensgaard, Philip Kollmannsberger, Łucja Kowalewska, Ioannis Papantoniou, Laurent Pieuchot, Tiago H V Pires, Lars D Renner, Andrew O Sageman‐furnas, Gerd E Schröder‐turk, Anupam Sengupta, Vikas R Sharma, Antonio Tagua, Caterina Tomba, Xavier Trepat, Sarah L Waters, Edwina F Yeo, Andreas Roschger, Cécile M Bidan, John W C Dunlop
Advanced Materials
4 Metamorphoses of the flow past an obstacle of a resonantly driven bistable polariton fluid
Vincent Hakim, Simon Pigeon, Amandine Aftalion
Physical Review B
Vincent Hakim, Simon Pigeon, Amandine Aftalion
Physical Review B
5 Beta oscillations and waves in motor cortex can be accounted for by the interplay of spatially structured connectivity and fluctuating inputs
Ling Kang, Jonas Ranft, Vincent Hakim
eLife
Ling Kang, Jonas Ranft, Vincent Hakim
eLife
6 Sticky issues in turbulent transport
Antonio Celani, Gautam Reddy, Massimo Vergassola
Annales Henri Poincaré
Antonio Celani, Gautam Reddy, Massimo Vergassola
Annales Henri Poincaré
2022
7 HaloTag-based reporters for sparse labeling and cell tracking
Lydie Couturier, Juan Luna, Khalil Mazouni, Claire Mestdagh, Minh-Son Phan, Francis Corson, Francois Schweisguth
Fly
Lydie Couturier, Juan Luna, Khalil Mazouni, Claire Mestdagh, Minh-Son Phan, Francis Corson, Francois Schweisguth
Fly
8 Manipulating the nature of embryonic mitotic waves
Luke Hayden, Woonyung Hur, Massimo Vergassola, Stefano Di Talia
Current Biology - CB
Luke Hayden, Woonyung Hur, Massimo Vergassola, Stefano Di Talia
Current Biology - CB
9 Alternation emerges as a multi-modal strategy for turbulent odor navigation
Nicola Rigolli, Gautam Reddy, Agnese Seminara, Massimo Vergassola
eLife
Nicola Rigolli, Gautam Reddy, Agnese Seminara, Massimo Vergassola
eLife
10 Waves in embryonic development
Stefano Di Talia, Massimo Vergassola
Annual review of biophysics and bioengineering
Stefano Di Talia, Massimo Vergassola
Annual review of biophysics and bioengineering
11 Cullin-5 mutants reveal collective sensing of the nucleocytoplasmic ratio in Drosophila embryogenesis
Luke Hayden, Anna Chao, Victoria E Deneke, Massimo Vergassola, Alberto Puliafito, Stefano Di Talia
Current Biology - CB
Luke Hayden, Anna Chao, Victoria E Deneke, Massimo Vergassola, Alberto Puliafito, Stefano Di Talia
Current Biology - CB
12 ICU Bed Availability Monitoring and analysis in the Grand Est region of France during the COVID-19 epidemic
Consortium Icubam, Laurent Bonnasse-Gahot, Maxime Dénès, Gabriel Dulac-Arnold, Sertan Girgin, François Husson, Valentin Iovene, Julie Josse, Antoine Kimmoun, François Landes, Jean-Pierre Nadal, Romain Primet, Frederico Quintao, Pierre Guillaume Raverdy, Vincent Rouvreau, Olivier Teboul, Roman Yurchak
Statistique et Société
Consortium Icubam, Laurent Bonnasse-Gahot, Maxime Dénès, Gabriel Dulac-Arnold, Sertan Girgin, François Husson, Valentin Iovene, Julie Josse, Antoine Kimmoun, François Landes, Jean-Pierre Nadal, Romain Primet, Frederico Quintao, Pierre Guillaume Raverdy, Vincent Rouvreau, Olivier Teboul, Roman Yurchak
Statistique et Société
13 Affinity maturation for an optimal balance between long-term immune coverage and short-term resource constraints
Victor Chardès, Massimo Vergassola, Aleksandra Walczak, Thierry Mora
Proceedings of the National Academy of Sciences of the United States of America
Victor Chardès, Massimo Vergassola, Aleksandra Walczak, Thierry Mora
Proceedings of the National Academy of Sciences of the United States of America
14 Categorical Perception: A Groundwork for Deep Learning
Laurent Bonnasse-Gahot, Jean-Pierre Nadal
Neural Computation
Laurent Bonnasse-Gahot, Jean-Pierre Nadal
Neural Computation
15 Confidence-controlled Hebbian learning efficiently extracts category membership from stimuli encoded in view of a categorization task
Kevin Berlemont, Jean-Pierre Nadal
Neural Computation
Kevin Berlemont, Jean-Pierre Nadal
Neural Computation
2021
16 Fluid mechanics of free subduction on a sphere. Part 1. The axisymmetric case
Alexander Chamolly, Neil M. Ribe
Journal of Fluid Mechanics
Alexander Chamolly, Neil M. Ribe
Journal of Fluid Mechanics
17 Modeling the mechanics of growing epithelia with a bilayer plate theory
Joseph Ackermann, Paul-Qiuyang Qu, Loïc Le Goff, Martine Ben Amar
The European Physical Journal Plus
Joseph Ackermann, Paul-Qiuyang Qu, Loïc Le Goff, Martine Ben Amar
The European Physical Journal Plus
18 Machine learning and computational modeling approaches towards detection of pathological activity markers in the cortex
Ivan Lazarevich
-THESE-
Ivan Lazarevich
-THESE-
19 Geometry of Gene Regulatory Dynamics
David A Rand, Archishman Raju, Meritxell Sáez, Francis Corson, Eric D Siggia
Proceedings of the National Academy of Sciences of the United States of America
David A Rand, Archishman Raju, Meritxell Sáez, Francis Corson, Eric D Siggia
Proceedings of the National Academy of Sciences of the United States of America
20 Origin of gradients in lipid density and surface tension between connected lipid droplet and bilayer
Abdou Rachid Thiam, Aymeric Chorlay, Lionel Forêt
Biophysical Journal
Abdou Rachid Thiam, Aymeric Chorlay, Lionel Forêt
Biophysical Journal
21 Human Inference in Changing Environments with Temporal Structure
Arthur Prat-Carrabin, Robert Wilson, Jonathan Cohen, Rava Azeredo da Silveira
Psychological Review
Arthur Prat-Carrabin, Robert Wilson, Jonathan Cohen, Rava Azeredo da Silveira
Psychological Review
22 Biases and Variability from Costly Bayesian Inference
Arthur Prat-Carrabin, Florent Meyniel, Misha Tsodyks, Rava Azeredo da Silveira
Entropy
Arthur Prat-Carrabin, Florent Meyniel, Misha Tsodyks, Rava Azeredo da Silveira
Entropy
23 Reciprocal stabilization of glycine receptors and gephyrin scaffold proteins at inhibitory synapses
Thomas Chapdelaine, Vincent Hakim, Antoine Triller, Jonas Ranft, Christian G Specht
Biophysical Journal
Thomas Chapdelaine, Vincent Hakim, Antoine Triller, Jonas Ranft, Christian G Specht
Biophysical Journal
24 Fat inclusions strongly alter membrane mechanics
Alexandre Santinho, Aymeric Chorlay, Lionel Foret, Abdou Rachid Thiam
Biophysical Journal
Alexandre Santinho, Aymeric Chorlay, Lionel Foret, Abdou Rachid Thiam
Biophysical Journal
2020
25 Synchronization, stochasticity and phase waves in neuronal networks with spatially-structured connectivity
Anirudh Kulkarni, Jonas Ranft, Vincent Hakim
Frontiers in Computational Neuroscience
Anirudh Kulkarni, Jonas Ranft, Vincent Hakim
Frontiers in Computational Neuroscience
26 Tissue-wide coordination of epithelium-to-neural stem cell transition in the Drosophila optic lobe requires Neuralized
Chloé Shard, Juan Luna-Escalante, François Schweisguth
Journal of Cell Biology
Chloé Shard, Juan Luna-Escalante, François Schweisguth
Journal of Cell Biology
27 From neural coding to decision-making
Kevin Berlemont
-THESE-
Kevin Berlemont
-THESE-
28 Cholinergic switch between two types of slow waves in cerebral cortex
Trang-Anh E. Nghiem, Núria Tort-Colet, Tomasz Gorski, Ulisse Ferrari, Shayan Moghimyfiroozabad, Jennifer S. Goldman, Bartosz Telenczuk, Cristiano Capone, Thierry Bal, Matteo Di Volo, Alain Destexhe
Cerebral Cortex
Trang-Anh E. Nghiem, Núria Tort-Colet, Tomasz Gorski, Ulisse Ferrari, Shayan Moghimyfiroozabad, Jennifer S. Goldman, Bartosz Telenczuk, Cristiano Capone, Thierry Bal, Matteo Di Volo, Alain Destexhe
Cerebral Cortex
29 Nonlinear neural network dynamics accounts for human confidence in a sequence of perceptual decisions
Kevin Berlemont, Jean-Remy Martin, Jérôme Sackur, Jean-Pierre Nadal
Scientific Reports
Kevin Berlemont, Jean-Remy Martin, Jérôme Sackur, Jean-Pierre Nadal
Scientific Reports
30 Scaling laws and snap-through events in indentation of perforated membranes
Fei Jia, Martine Ben Amar
Journal of the Mechanics and Physics of Solids
Fei Jia, Martine Ben Amar
Journal of the Mechanics and Physics of Solids
31 A tensile ring drives tissue flows to shape the gastrulating amniote embryo
Mehdi Saadaoui, Didier Rocancourt, Julian Roussel, Francis Corson, Jerome Gros
Science
Mehdi Saadaoui, Didier Rocancourt, Julian Roussel, Francis Corson, Jerome Gros
Science
32 Tribute to an exemplary man: Yves Couder
Martine Ben Amar, Laurent Limat, Olivier Pouliquen, Emmanuel Villermaux
Comptes Rendus. Mécanique
Martine Ben Amar, Laurent Limat, Olivier Pouliquen, Emmanuel Villermaux
Comptes Rendus. Mécanique
33 From growing bubbles and dendrites to biological forms
Vincent Hakim
Comptes Rendus. Mécanique
Vincent Hakim
Comptes Rendus. Mécanique
34 Tip growth in morpho-elasticity
Martine Ben Amar, Julien Dervaux
Comptes Rendus. Mécanique
Martine Ben Amar, Julien Dervaux
Comptes Rendus. Mécanique
35 The geometry of information coding in correlated neural populations
Rava Azeredo da Silveira, Fred Rieke
Annual Review of Neuroscience
Rava Azeredo da Silveira, Fred Rieke
Annual Review of Neuroscience
36 Lifetime of a structure evolving by cluster aggregation and particle loss, and application to postsynaptic scaffold domains
Vincent Hakim, Jonas Ranft
Physical Review E
Vincent Hakim, Jonas Ranft
Physical Review E
2019
37 Modeling morphogenesis on epithelial tissues : from forces to geometry and back
Diego Contreras
-THESE-
Diego Contreras
-THESE-
38 Bridging single neuron dynamics to global brain states
Jennifer S Goldman, Núria Tort-Colet, Matteo Di Volo, Eduarda Susin, Jules Bouté, Mélissa Dali, Mallory Carlu, Trang-Anh Nghiem, Tomasz Gorski, Alain Destexhe
Frontiers in Systems Neuroscience
Jennifer S Goldman, Núria Tort-Colet, Matteo Di Volo, Eduarda Susin, Jules Bouté, Mélissa Dali, Mallory Carlu, Trang-Anh Nghiem, Tomasz Gorski, Alain Destexhe
Frontiers in Systems Neuroscience
39 Regulation of Notch output dynamics via specific E(spl)-HLH factors during bristle patterning in Drosophila
Lydie Couturier, Khalil Mazouni, Francis Corson, François Schweisguth
Nature Communications
Lydie Couturier, Khalil Mazouni, Francis Corson, François Schweisguth
Nature Communications
40 Chemotaxis as a navigation strategy to boost range expansion
Jonas Cremer, Tomoya Honda, Ying Tang, Jerome Wong-Ng, Massimo Vergassola, Terence Hwa
Nature
Jonas Cremer, Tomoya Honda, Ying Tang, Jerome Wong-Ng, Massimo Vergassola, Terence Hwa
Nature
41 Progressive recruitment of distal MEC-4 channels determines touch response strength in C. elegans
Samata Katta, Alessandro Sanzeni, Alakananda Das, Massimo Vergassola, Miriam Goodman
Journal of General Physiology
Samata Katta, Alessandro Sanzeni, Alakananda Das, Massimo Vergassola, Miriam Goodman
Journal of General Physiology
42 Growth and remodelling of living tissues: perspectives, challenges and opportunities
Davide Ambrosi, Martine Ben Amar, Christian Cyron, Antonio Desimone, Alain Goriely, Jay Humphrey, Ellen Kuhl
Journal of the Royal Society Interface
Davide Ambrosi, Martine Ben Amar, Christian Cyron, Antonio Desimone, Alain Goriely, Jay Humphrey, Ellen Kuhl
Journal of the Royal Society Interface
43 Self-Organization in Pattern Formation
François Schweisguth, Francis Corson
Developmental Cell
François Schweisguth, Francis Corson
Developmental Cell
44 Noisy Memory and Over-Reaction to News
Rava Azeredo da Silveira, Michael Woodford
American Economic Association Papers and Proceedings
Rava Azeredo da Silveira, Michael Woodford
American Economic Association Papers and Proceedings
45 Self-Organized Nuclear Positioning Synchronizes the Cell Cycle in Drosophila Embryos
Victoria Deneke, Alberto Puliafito, Daniel Krueger, Avaneesh Narla, Alessandro de Simone, Luca Primo, Massimo Vergassola, Stefano de Renzis, Stefano Di Talia
Cell
Victoria Deneke, Alberto Puliafito, Daniel Krueger, Avaneesh Narla, Alessandro de Simone, Luca Primo, Massimo Vergassola, Stefano de Renzis, Stefano Di Talia
Cell
46 Residential income segregation: A behavioral model of the housing market
Marco Pangallo, Jean-Pierre Nadal, Annick Vignes
Journal of Economic Behavior and Organization
Marco Pangallo, Jean-Pierre Nadal, Annick Vignes
Journal of Economic Behavior and Organization
47 Functional Diversity in the Retina Improves the Population Code
Michael Berry Ii, Felix Lebois, Avi Ziskind, Rava Azeredo da Silveira
Neural Computation
Michael Berry Ii, Felix Lebois, Avi Ziskind, Rava Azeredo da Silveira
Neural Computation
48 Perceptual decision making: Biases in post-error reaction times explained by attractor network dynamics
Kevin Berlemont, Jean-Pierre Nadal
Journal of Neuroscience
Kevin Berlemont, Jean-Pierre Nadal
Journal of Neuroscience
49 Glutamate spillover in C. elegans triggers repetitive behavior through presynaptic activation of MGL-2/mGluR5
Menachem Katz, Francis Corson, Wolfgang Keil, Anupriya Singhal, Andrea Bae, Yun Lu, Yupu Liang, Shai Shaham
Nature Communications
Menachem Katz, Francis Corson, Wolfgang Keil, Anupriya Singhal, Andrea Bae, Yun Lu, Yupu Liang, Shai Shaham
Nature Communications
50 SNARE Machinery is optimized for ultra-fast fusion
Fabio Manca, Frédéric Pincet, Lev Truskinovsky, James E Rothman, Lionel Foret, Matthieu Caruel
Proceedings of the National Academy of Sciences of the United States of America
Fabio Manca, Frédéric Pincet, Lev Truskinovsky, James E Rothman, Lionel Foret, Matthieu Caruel
Proceedings of the National Academy of Sciences of the United States of America