2020
1 Learning the heterogeneous hypermutation landscape of immunoglobulins from high-throughput repertoire data
Natanael Spisak, Aleksandra Walczak, Thierry Mora
Nucleic Acids Research
Natanael Spisak, Aleksandra Walczak, Thierry Mora
Nucleic Acids Research
2 SOS: online probability estimation and generation of T-and B-cell receptors
Giulio Isacchini, Carlos Olivares, Armita Nourmohammad, Aleksandra Walczak, Thierry Mora
Bioinformatics
Giulio Isacchini, Carlos Olivares, Armita Nourmohammad, Aleksandra Walczak, Thierry Mora
Bioinformatics
3 A mechanism for hunchback promoters to readout morphogenetic positional information in less than a minute
Jonathan Desponds, Massimo Vergassola, Aleksandra Walczak
eLife
Jonathan Desponds, Massimo Vergassola, Aleksandra Walczak
eLife
4 Building General Langevin Models from Discrete Datasets
Federica Ferretti, Victor Chardès, Thierry Mora, Aleksandra Walczak, Irene Giardina
Physical Review X
Federica Ferretti, Victor Chardès, Thierry Mora, Aleksandra Walczak, Irene Giardina
Physical Review X
5 Quantitative modeling of the effect of antigen dosage on B-cell affinity distributions in maturating germinal centers
Marco Molari, Klaus Eyer, Jean Baudry, Simona Cocco, Remi Monasson
eLife
Marco Molari, Klaus Eyer, Jean Baudry, Simona Cocco, Remi Monasson
eLife
6 Generative models of T-cell receptor sequences
Giulio Isacchini, Zachary Sethna, Yuval Elhanati, Armita Nourmohammad, Aleksandra Walczak, Thierry Mora
Physical Review E
Giulio Isacchini, Zachary Sethna, Yuval Elhanati, Armita Nourmohammad, Aleksandra Walczak, Thierry Mora
Physical Review E
7 Spectrum of multispace Euclidean random matrices
Aldo Battista, Remi Monasson
Physical Review E
Aldo Battista, Remi Monasson
Physical Review E
8 Primary and secondary anti-viral response captured by the dynamics and phenotype of individual T cell clones
Anastasia Minervina, Mikhail Pogorelyy, Ekaterina Komech, Vadim Karnaukhov, Petra Bacher, Elisa Rosati, Andre Franke, Dmitriy Chudakov, Ilgar Mamedov, Yuri Lebedev, Thierry Mora, Aleksandra Walczak
eLife
Anastasia Minervina, Mikhail Pogorelyy, Ekaterina Komech, Vadim Karnaukhov, Petra Bacher, Elisa Rosati, Andre Franke, Dmitriy Chudakov, Ilgar Mamedov, Yuri Lebedev, Thierry Mora, Aleksandra Walczak
eLife
9 Capacity-Resolution Trade-Off in the Optimal Learning of Multiple Low-Dimensional Manifolds by Attractor Neural Networks
Aldo Battista, Rémi Monasson
Physical Review Letters
Aldo Battista, Rémi Monasson
Physical Review Letters
10 Inference of compressed Potts graphical models
Francesca Rizzato, Alice Coucke, Eleonora de Leonardis, J. P. Barton, Jérôme Tubiana, Remi Monasson, Simona Cocco
Physical Review E
Francesca Rizzato, Alice Coucke, Eleonora de Leonardis, J. P. Barton, Jérôme Tubiana, Remi Monasson, Simona Cocco
Physical Review E
11 Quantitative Immunology for Physicists
Grégoire Altan-Bonnet, Thierry Mora, Aleksandra M. Walczak
Physics Reports
Grégoire Altan-Bonnet, Thierry Mora, Aleksandra M. Walczak
Physics Reports
12 Inferring the immune response from repertoire sequencing
Maximilian Puelma Touzel, Aleksandra Walczak, Thierry Mora
PLoS Computational Biology
Maximilian Puelma Touzel, Aleksandra Walczak, Thierry Mora
PLoS Computational Biology
13 Gaussian Closure Scheme in the Quasi--Linkage Equilibrium Regime of Evolving Genome Populations
Eugenio Mauri, Simona Cocco, Rémi Monasson
EPL - Europhysics Letters
Eugenio Mauri, Simona Cocco, Rémi Monasson
EPL - Europhysics Letters
14 Exploiting B Cell Receptor Analyses to Inform on HIV-1 Vaccination Strategies
Christoph Kreer, Henning Gruell, Thierry Mora, Aleksandra Walczak, Florian Klein
Vaccines
Christoph Kreer, Henning Gruell, Thierry Mora, Aleksandra Walczak, Florian Klein
Vaccines
14
Publications
Documents récupérés de l'archive ouverte HAL 