2021

1   adabmDCA: adaptive Boltzmann machine learning for biological sequences
 Anna Paola Muntoni, Andrea Pagnani, Martin Weigt, Francesco Zamponi
BMC Bioinformatics
2   Efficient generative modeling of protein sequences using simple autoregressive models
 Jeanne Trinquier, Guido Uguzzoni, Andrea Pagnani, Francesco Zamponi, Martin Weigt
Nature Communications
3   Three simple scenarios for high-dimensional sphere packings
 Patrick Charbonneau, Peter Morse, Will Perkins, Francesco Zamponi
Physical Review E
4   Active matter in infinite dimensions: Fokker–Planck equation and dynamical mean-field theory at low density
 Francesco Zamponi, Thibaut Arnoulx de Pirey, Alessandro Manacorda, Frédéric van Wijland
Journal of Chemical Physics
5   Sparse generative modeling via parameter-reduction of Boltzmann machines: application to protein-sequence families
 Pierre Barrat-Charlaix, Anna Paola Muntoni, Kai Shimagaki, Martin Weigt, Francesco Zamponi
Physical Review E
6   Properties of Equilibria and Glassy Phases of the Random Lotka-Volterra Model with Demographic Noise
 Ada Altieri, Félix Roy, Chiara Cammarota, Giulio Biroli
Physical Review Letters
7   Mean-Field Caging in a Random Lorentz Gas
 Giulio Biroli, Patrick Charbonneau, Yi Hu, Harukuni Ikeda, Grzegorz Szamel, Francesco Zamponi
Journal of Physical Chemistry B
8   Good speciation and endogenous business cycles in a constraint satisfaction macroeconomic model
 Dhruv Sharma, Jean-Philippe Bouchaud, Marco Tarzia, Francesco Zamponi
Journal of Statistical Mechanics: Theory and Experiment
9   Random Assignment Problems on 2d Manifolds
 Dario Benedetto, Emanuele Caglioti, Sergio Caracciolo, Matteo d'Achille, Gabriele Sicuro, Andrea Sportiello
Journal of Statistical Physics
10   Relationship between two-level systems and quasilocalized normal modes in glasses
 Dmytro Khomenko, David Reichman, Francesco Zamponi
Physical Review Materials
11   Low-frequency vibrational spectrum of mean-field disordered systems
 Eran Bouchbinder, Edan Lerner, Corrado Rainone, Pierfrancesco Urbani, Francesco Zamponi
Physical Review B
12   Elastoplasticity Mediates Dynamical Heterogeneity Below the Mode-Coupling Temperature
 Rahul N Chacko, François P. Landes, Giulio Biroli, Olivier Dauchot, Andrea J Liu, David R Reichman
Physical Review Letters
13   V-, U-, L-or W-shaped economic recovery after Covid-19: Insights from an Agent Based Model
 Dhruv Sharma, Jean-Philippe Bouchaud, Stanislao Gualdi, Marco Tarzia, Francesco Zamponi
PLoS ONE
14   Interplay between percolation and glassiness in the random Lorentz gas
 Giulio Biroli, Patrick Charbonneau, Eric I. Corwin, Yi Hu, Harukuni Ikeda, Grzegorz Szamel, Francesco Zamponi
Physical Review E
15   Generalisation error in learning with random features and the hidden manifold model
 Federica Gerace, Bruno Loureiro, Florent Krzakala, Marc Mezard, Lenka Zdeborová
Journal of Statistical Mechanics: Theory and Experiment
16   Dynamical instantons and activated processes in mean-field glass models
 Valentina Ros, Giulio Biroli, Chiara Cammarota
SciPost Physics
17   Mean-field model of interacting quasilocalized excitations in glasses
 Corrado Rainone, Pierfrancesco Urbani, Francesco Zamponi, Edan Lerner, Eran Bouchbinder
SciPost Physics Core
18   Out-of-equilibrium phase diagram of the quantum random energy model
 Giulio Biroli, Davide Facoetti, Marco Schiró, Marco Tarzia, Pierpaolo Vivo
Physical Review B
19   Large deviations of extreme eigenvalues of generalized sample covariance matrices
 Antoine Maillard
EPL - Europhysics Letters
20   Searching for the Gardner transition in glassy glycerol
 Samuel Albert, Giulio Biroli, François Ladieu, Roland Tourbot, Pierfrancesco Urbani
Physical Review Letters
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Publications