2021
1 adabmDCA: adaptive Boltzmann machine learning for biological sequences
Anna Paola Muntoni, Andrea Pagnani, Martin Weigt, Francesco Zamponi
BMC Bioinformatics
Anna Paola Muntoni, Andrea Pagnani, Martin Weigt, Francesco Zamponi
BMC Bioinformatics
2 Three simple scenarios for high-dimensional sphere packings
Patrick Charbonneau, Peter Morse, Will Perkins, Francesco Zamponi
Physical Review E
Patrick Charbonneau, Peter Morse, Will Perkins, Francesco Zamponi
Physical Review E
3 Efficient generative modeling of protein sequences using simple autoregressive models
Jeanne Trinquier, Guido Uguzzoni, Andrea Pagnani, Francesco Zamponi, Martin Weigt
Nature Communications
Jeanne Trinquier, Guido Uguzzoni, Andrea Pagnani, Francesco Zamponi, Martin Weigt
Nature Communications
4 Active matter in infinite dimensions: Fokker–Planck equation and dynamical mean-field theory at low density
Francesco Zamponi, Thibaut Arnoulx de Pirey, Alessandro Manacorda, Frédéric van Wijland
The Journal of Chemical Physics
Francesco Zamponi, Thibaut Arnoulx de Pirey, Alessandro Manacorda, Frédéric van Wijland
The Journal of Chemical Physics
5 PAGnol: An Extra-Large French Generative Model
Julien Launay, Elena Tommasone, Baptiste Pannier, François Boniface, Amélie Chatelain, Alessandro Cappelli, Iacopo Poli, Djamé Seddah
-REPORT-
Julien Launay, Elena Tommasone, Baptiste Pannier, François Boniface, Amélie Chatelain, Alessandro Cappelli, Iacopo Poli, Djamé Seddah
-REPORT-
6 Sparse generative modeling via parameter-reduction of Boltzmann machines: application to protein-sequence families
Pierre Barrat-Charlaix, Anna Paola Muntoni, Kai Shimagaki, Martin Weigt, Francesco Zamponi
Physical Review E
Pierre Barrat-Charlaix, Anna Paola Muntoni, Kai Shimagaki, Martin Weigt, Francesco Zamponi
Physical Review E
7 Properties of Equilibria and Glassy Phases of the Random Lotka-Volterra Model with Demographic Noise
Ada Altieri, Félix Roy, Chiara Cammarota, Giulio Biroli
Physical Review Letters
Ada Altieri, Félix Roy, Chiara Cammarota, Giulio Biroli
Physical Review Letters
8 Mean-Field Caging in a Random Lorentz Gas
Giulio Biroli, Patrick Charbonneau, Yi Hu, Harukuni Ikeda, Grzegorz Szamel, Francesco Zamponi
Journal of Physical Chemistry B
Giulio Biroli, Patrick Charbonneau, Yi Hu, Harukuni Ikeda, Grzegorz Szamel, Francesco Zamponi
Journal of Physical Chemistry B
9 Good speciation and endogenous business cycles in a constraint satisfaction macroeconomic model
Dhruv Sharma, Jean-Philippe Bouchaud, Marco Tarzia, Francesco Zamponi
Journal of Statistical Mechanics: Theory and Experiment
Dhruv Sharma, Jean-Philippe Bouchaud, Marco Tarzia, Francesco Zamponi
Journal of Statistical Mechanics: Theory and Experiment
10 Random Assignment Problems on 2d Manifolds
Dario Benedetto, Emanuele Caglioti, Sergio Caracciolo, Matteo d'Achille, Gabriele Sicuro, Andrea Sportiello
Journal of Statistical Physics
Dario Benedetto, Emanuele Caglioti, Sergio Caracciolo, Matteo d'Achille, Gabriele Sicuro, Andrea Sportiello
Journal of Statistical Physics
11 Low-frequency vibrational spectrum of mean-field disordered systems
Eran Bouchbinder, Edan Lerner, Corrado Rainone, Pierfrancesco Urbani, Francesco Zamponi
Physical Review B
Eran Bouchbinder, Edan Lerner, Corrado Rainone, Pierfrancesco Urbani, Francesco Zamponi
Physical Review B
12 Relationship between two-level systems and quasilocalized normal modes in glasses
Dmytro Khomenko, David Reichman, Francesco Zamponi
Physical Review Materials
Dmytro Khomenko, David Reichman, Francesco Zamponi
Physical Review Materials
13 Elastoplasticity Mediates Dynamical Heterogeneity Below the Mode-Coupling Temperature
Rahul N Chacko, François P. Landes, Giulio Biroli, Olivier Dauchot, Andrea J Liu, David R Reichman
Physical Review Letters
Rahul N Chacko, François P. Landes, Giulio Biroli, Olivier Dauchot, Andrea J Liu, David R Reichman
Physical Review Letters
14 V-, U-, L-or W-shaped economic recovery after Covid-19: Insights from an Agent Based Model
Dhruv Sharma, Jean-Philippe Bouchaud, Stanislao Gualdi, Marco Tarzia, Francesco Zamponi
PLoS ONE
Dhruv Sharma, Jean-Philippe Bouchaud, Stanislao Gualdi, Marco Tarzia, Francesco Zamponi
PLoS ONE
15 Interplay between percolation and glassiness in the random Lorentz gas
Giulio Biroli, Patrick Charbonneau, Eric I. Corwin, Yi Hu, Harukuni Ikeda, Grzegorz Szamel, Francesco Zamponi
Physical Review E
Giulio Biroli, Patrick Charbonneau, Eric I. Corwin, Yi Hu, Harukuni Ikeda, Grzegorz Szamel, Francesco Zamponi
Physical Review E
16 Generalisation error in learning with random features and the hidden manifold model
Federica Gerace, Bruno Loureiro, Florent Krzakala, Marc Mezard, Lenka Zdeborová
Journal of Statistical Mechanics: Theory and Experiment
Federica Gerace, Bruno Loureiro, Florent Krzakala, Marc Mezard, Lenka Zdeborová
Journal of Statistical Mechanics: Theory and Experiment
17 Mean-field model of interacting quasilocalized excitations in glasses
Corrado Rainone, Pierfrancesco Urbani, Francesco Zamponi, Edan Lerner, Eran Bouchbinder
SciPost Physics Core
Corrado Rainone, Pierfrancesco Urbani, Francesco Zamponi, Edan Lerner, Eran Bouchbinder
SciPost Physics Core
18 Dynamical instantons and activated processes in mean-field glass models
Valentina Ros, Giulio Biroli, Chiara Cammarota
SciPost Physics
Valentina Ros, Giulio Biroli, Chiara Cammarota
SciPost Physics
19 Out-of-equilibrium phase diagram of the quantum random energy model
Giulio Biroli, Davide Facoetti, Marco Schiró, Marco Tarzia, Pierpaolo Vivo
Physical Review B
Giulio Biroli, Davide Facoetti, Marco Schiró, Marco Tarzia, Pierpaolo Vivo
Physical Review B
20 Large deviations of extreme eigenvalues of generalized sample covariance matrices
Antoine Maillard
EPL - Europhysics Letters
Antoine Maillard
EPL - Europhysics Letters
21 Searching for the Gardner transition in glassy glycerol
Samuel Albert, Giulio Biroli, François Ladieu, Roland Tourbot, Pierfrancesco Urbani
Physical Review Letters
Samuel Albert, Giulio Biroli, François Ladieu, Roland Tourbot, Pierfrancesco Urbani
Physical Review Letters
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Publications