•Axe Biophysique

Biophysique et Neuroscience Théoriques

Publications

Biophysique et Neuroscience Théoriques

51 Two-fluid dynamics and micron-thin boundary layers shape cytoplasmic flows in early Drosophila embryos
Claudio Hernández-López, Alberto Puliafito, Yitong Xu, Ziqi Lu, Stefano Di Talia, Massimo Vergassola
2023 - Proceedings of the National Academy of Sciences of the United States of America

52 Thermo-aqueous coupling behaviors for shape memory hydrogels: A statistical–mechanical model and simulations faced with experiments
Yunqiang Hu, Chengjun Zeng, Martine Ben Amar, Fei Jia, Yanju Liu, Jinsong Leng
2023 - International Journal of Solids and Structures

53 Onsager’s variational principle in proliferating biological tissues, in presence of activity and anisotropy
Joseph Ackermann, Martine Ben Amar
2023 - The European Physical Journal Plus

54 LC3 conjugation to lipid droplets
Mohyeddine Omrane, Thomas Melia, Abdou Rachid Thiam
2023 - Autophagy

55 Curvature in Biological Systems: Its Quantification, Emergence, and Implications across the Scales
Barbara Schamberger, Ricardo Ziege, Karine Anselme, Martine Ben Amar, Michał Bykowski, André P G Castro, Amaia Cipitria, Rhoslyn A Coles, Rumiana Dimova, Michaela Eder, Sebastian Ehrig, Luis M Escudero, Myfanwy E Evans, Paulo R Fernandes, Peter Fratzl, Liesbet Geris, Notburga Gierlinger, Edouard Hannezo, Aleš Iglič, Jacob J K Kirkensgaard, Philip Kollmannsberger, Łucja Kowalewska, Ioannis Papantoniou, Laurent Pieuchot, Tiago H V Pires, Lars D Renner, Andrew O Sageman‐furnas, Gerd E Schröder‐turk, Anupam Sengupta, Vikas R Sharma, Antonio Tagua, Caterina Tomba, Xavier Trepat, Sarah L Waters, Edwina F Yeo, Andreas Roschger, Cécile M Bidan, John W C Dunlop
2023 - Advanced Materials

56 Curvature-Regulated Multiphase Patterns in Tori
Ting Wang, Zhijun Dai, Michel Potier-Ferry, Fan Xu
2023 - Physical Review Letters

57 Metamorphoses of the flow past an obstacle of a resonantly driven bistable polariton fluid
Vincent Hakim, Simon Pigeon, Amandine Aftalion
2023 - Physical Review B

58 Stochasticity and Drug Effects in Dynamical Model for Cancer Stem Cells
Ludovico Mori, Martine Ben Amar
2023 - Cancers

59 A comprehensive neural simulation of slow-wave sleep and highly responsive wakefulness dynamics
Jennifer S. Goldman, Lionel Kusch, David Aquilue, Bahar Hazal Yalçınkaya, Damien Depannemaecker, Kevin Ancourt, Trang-Anh Nghiem, Viktor Jirsa, Alain Destexhe
2023 - Frontiers in Computational Neuroscience

60 Beta oscillations and waves in motor cortex can be accounted for by the interplay of spatially structured connectivity and fluctuating inputs
Ling Kang, Jonas Ranft, Vincent Hakim
2023 - eLife

61 Application of spin glass ideas in social sciences, economics and finance
Jean Philippe Bouchaud, Matteo Marsili, Jean-Pierre Nadal
2023 -

62 Morphogenesis in space offers challenges and opportunities for soft matter and biophysics
Martine Ben Amar, Pasquale Ciarletta, Pierre A Haas
2023 - Communications Physics

63 HaloTag-based reporters for sparse labeling and cell tracking
Lydie Couturier, Juan Luna, Khalil Mazouni, Claire Mestdagh, Minh-Son Phan, Francis Corson, Francois Schweisguth
2022 - Fly

64 Minimizing the Elastic Energy of Growing Leaves by Conformal Mapping
Anna Dai, Martine Ben Amar
2022 - Physical Review Letters

65 Manipulating the nature of embryonic mitotic waves
Luke Hayden, Woonyung Hur, Massimo Vergassola, Stefano Di Talia
2022 - Current Biology

66 Alternation emerges as a multi-modal strategy for turbulent odor navigation
Nicola Rigolli, Gautam Reddy, Agnese Seminara, Massimo Vergassola
2022 - eLife

67 Discovering sparse control strategies in neural activity
Edward Lee, Xiaowen Chen, Bryan Daniels
2022 - PLoS Computational Biology

68 Waves in embryonic development
Stefano Di Talia, Massimo Vergassola
2022 - Annual review of biophysics and bioengineering

69 Cullin-5 mutants reveal collective sensing of the nucleocytoplasmic ratio in Drosophila embryogenesis
Luke Hayden, Anna Chao, Victoria E Deneke, Massimo Vergassola, Alberto Puliafito, Stefano Di Talia
2022 - Current Biology

70 ICU Bed Availability Monitoring and analysis in the Grand Est region of France during the COVID-19 epidemic
Consortium Icubam, Laurent Bonnasse-Gahot, Maxime Dénès, Gabriel Dulac-Arnold, Sertan Girgin, François Husson, Valentin Iovene, Julie Josse, Antoine Kimmoun, François Landes, Jean-Pierre Nadal, Romain Primet, Frederico Quintao, Pierre Guillaume Raverdy, Vincent Rouvreau, Olivier Teboul, Roman Yurchak
2022 - Statistique et Société

71 Morpho-elasticity of human pluripotent stem cell cysts
Joseph Ackermann, Philippe J.R. Cohen, Kevin Alessandri, Andrea Leonard, Pierre Nassoy, Jean-François Joanny, Martine Ben Amar
2022 - Journal of the Mechanics and Physics of Solids

72 Affinity maturation for an optimal balance between long-term immune coverage and short-term resource constraints
Victor Chardès, Massimo Vergassola, Aleksandra Walczak, Thierry Mora
2022 - Proceedings of the National Academy of Sciences of the United States of America

73 Categorical Perception: A Groundwork for Deep Learning
Laurent Bonnasse-Gahot, Jean-Pierre Nadal
2022 - Neural Computation

74 Confidence-controlled Hebbian learning efficiently extracts category membership from stimuli encoded in view of a categorization task
Kevin Berlemont, Jean-Pierre Nadal
2022 - Neural Computation

75 Sector search strategies for odor trail tracking
Gautam Reddy, Boris Shraiman, Massimo Vergassola
2021 - Proceedings of the National Academy of Sciences of the United States of America

76 Fluid mechanics of free subduction on a sphere. Part 1. The axisymmetric case
Alexander Chamolly, Neil M. Ribe
2021 - Journal of Fluid Mechanics

77 Modeling the mechanics of growing epithelia with a bilayer plate theory
Joseph Ackermann, Paul-Qiuyang Qu, Loïc Le Goff, Martine Ben Amar
2021 - The European Physical Journal Plus

78 Machine learning and computational modeling approaches towards detection of pathological activity markers in the cortex
Ivan Lazarevich
2021 - -THESE-

79 Geometry of Gene Regulatory Dynamics
David A Rand, Archishman Raju, Meritxell Sáez, Francis Corson, Eric D Siggia
2021 - Proceedings of the National Academy of Sciences of the United States of America

80 Origin of gradients in lipid density and surface tension between connected lipid droplet and bilayer
Abdou Rachid Thiam, Aymeric Chorlay, Lionel Forêt
2021 - Biophysical Journal

81 Human Inference in Changing Environments with Temporal Structure
Arthur Prat-Carrabin, Robert Wilson, Jonathan Cohen, Rava Azeredo da Silveira
2021 - Psychological Review

82 Multi-cellular aggregates, a model for living matter
Joseph Ackermann, Martine Ben Amar, J.-F. Joanny
2021 - Physics Reports

83 The geometry of information coding in correlated neural populations
Rava Azeredo da Silveira, Fred Rieke
2021 - Annual Review of Neuroscience

84 Biases and Variability from Costly Bayesian Inference
Arthur Prat-Carrabin, Florent Meyniel, Misha Tsodyks, Rava Azeredo da Silveira
2021 - Entropy

85 A suite of neurophotonic tools to underpin the contribution of internal brain states in fMRI
Philipp Mächler, Thomas Broggini, Celine Mateo, Martin Thunemann, Natalie Fomin-Thunemann, Patrick Doran, Ikbal Sencan, Kivilcim Kilic, Michèle Desjardins, Hana Uhlirova, Mohammad Yaseen, David Boas, Andreas Linninger, Massimo Vergassola, Xin Yu, Laura Lewis, Jonathan Polimeni, Bruce Rosen, Sava Sakadžić, Richard Buxton, Martin Lauritzen, David Kleinfeld, Anna Devor
2021 - Current Opinion in Biomedical Engineering

86 Reciprocal stabilization of glycine receptors and gephyrin scaffold proteins at inhibitory synapses
Thomas Chapdelaine, Vincent Hakim, Antoine Triller, Jonas Ranft, Christian G Specht
2021 - Biophysical Journal

87 Fat inclusions strongly alter membrane mechanics
Alexandre Santinho, Aymeric Chorlay, Lionel Foret, Abdou Rachid Thiam
2021 - Biophysical Journal

88 From growing bubbles and dendrites to biological forms
Vincent Hakim
2020 - Comptes Rendus. Mécanique

89 Synchronization, stochasticity and phase waves in neuronal networks with spatially-structured connectivity
Anirudh Kulkarni, Jonas Ranft, Vincent Hakim
2020 - Frontiers in Computational Neuroscience

90 Decision-making at a T-junction by gradient-sensing microscopic agents
Tanvi Gandhi, Jinzi Mac Huang, Antoine Aubret, Yaocheng Li, Sophie Ramananarivo, Massimo Vergassola, Jérémie Palacci
2020 - Physical Review Fluids

91 Tissue-wide coordination of epithelium-to-neural stem cell transition in the Drosophila optic lobe requires Neuralized
Chloé Shard, Juan Luna-Escalante, François Schweisguth
2020 - Journal of Cell Biology

92 Antagonistic odor interactions in olfactory sensory neurons are widespread in freely breathing mice
Joseph D Zak, Gautam Reddy, Massimo Vergassola, Venkatesh N Murthy
2020 - Nature Communications

93 From neural coding to decision-making
Kevin Berlemont
2020 - -THESE-

94 Detection of Topological Materials with Machine Learning
Nikolas Claussen, B. Andrei Bernevig, Nicolas Regnault
2020 - Physical Review B

95 Cholinergic switch between two types of slow waves in cerebral cortex
Trang-Anh Nghiem, Núria Tort-Colet, Tomasz Gorski, Ulisse Ferrari, Shayan Moghimyfiroozabad, Jennifer S. Goldman, Bartosz Telenczuk, Cristiano Capone, Thierry Bal, Matteo Di Volo, Alain Destexhe
2020 - Cerebral Cortex

96 Nonlinear neural network dynamics accounts for human confidence in a sequence of perceptual decisions
Kevin Berlemont, Jean-Remy Martin, Jérôme Sackur, Jean-Pierre Nadal
2020 - Scientific Reports

97 Physical and Mathematical Modeling in Oncology: Examples
Martine Ben Amar
2020 -

98 Scaling laws and snap-through events in indentation of perforated membranes
Fei Jia, Martine Ben Amar
2020 - Journal of the Mechanics and Physics of Solids

99 A tensile ring drives tissue flows to shape the gastrulating amniote embryo
Mehdi Saadaoui, Didier Rocancourt, Julian Roussel, Francis Corson, Jerome Gros
2020 - Science

100 Tribute to an exemplary man: Yves Couder
Martine Ben Amar, Laurent Limat, Olivier Pouliquen, Emmanuel Villermaux
2020 - Comptes Rendus. Mécanique

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121

Publications

8

Années

Biophysique