2023

1   Two-fluid dynamics and micron-thin boundary layers shape cytoplasmic flows in early Drosophila embryos
 Claudio Hernández-López, Alberto Puliafito, Yitong Xu, Ziqi Lu, Stefano Di Talia, Massimo Vergassola
Proceedings of the National Academy of Sciences of the United States of America
2   LC3 conjugation to lipid droplets
 Mohyeddine Omrane, Thomas Melia, Abdou Rachid Thiam
Autophagy
3   Curvature in Biological Systems: Its Quantification, Emergence, and Implications across the Scales
 Barbara Schamberger, Ricardo Ziege, Karine Anselme, Martine Ben Amar, Michał Bykowski, André P G Castro, Amaia Cipitria, Rhoslyn A Coles, Rumiana Dimova, Michaela Eder, Sebastian Ehrig, Luis M Escudero, Myfanwy E Evans, Paulo R Fernandes, Peter Fratzl, Liesbet Geris, Notburga Gierlinger, Edouard Hannezo, Aleš Iglič, Jacob J K Kirkensgaard, Philip Kollmannsberger, Łucja Kowalewska, Ioannis Papantoniou, Laurent Pieuchot, Tiago H V Pires, Lars D Renner, Andrew O Sageman‐furnas, Gerd E Schröder‐turk, Anupam Sengupta, Vikas R Sharma, Antonio Tagua, Caterina Tomba, Xavier Trepat, Sarah L Waters, Edwina F Yeo, Andreas Roschger, Cécile M Bidan, John W C Dunlop
Advanced Materials
4   Metamorphoses of the flow past an obstacle of a resonantly driven bistable polariton fluid
 Vincent Hakim, Simon Pigeon, Amandine Aftalion
Physical Review B
5   Beta oscillations and waves in motor cortex can be accounted for by the interplay of spatially structured connectivity and fluctuating inputs
 Ling Kang, Jonas Ranft, Vincent Hakim
eLife
6   Sticky issues in turbulent transport
 Antonio Celani, Gautam Reddy, Massimo Vergassola
Annales Henri Poincaré

2022

7   HaloTag-based reporters for sparse labeling and cell tracking
 Lydie Couturier, Juan Luna, Khalil Mazouni, Claire Mestdagh, Minh-Son Phan, Francis Corson, Francois Schweisguth
Fly
8   Manipulating the nature of embryonic mitotic waves
 Luke Hayden, Woonyung Hur, Massimo Vergassola, Stefano Di Talia
Current Biology - CB
9   Alternation emerges as a multi-modal strategy for turbulent odor navigation
 Nicola Rigolli, Gautam Reddy, Agnese Seminara, Massimo Vergassola
eLife
10   Waves in embryonic development
 Stefano Di Talia, Massimo Vergassola
Annual review of biophysics and bioengineering
11   Cullin-5 mutants reveal collective sensing of the nucleocytoplasmic ratio in Drosophila embryogenesis
 Luke Hayden, Anna Chao, Victoria E Deneke, Massimo Vergassola, Alberto Puliafito, Stefano Di Talia
Current Biology - CB
12   ICU Bed Availability Monitoring and analysis in the Grand Est region of France during the COVID-19 epidemic
 Consortium Icubam, Laurent Bonnasse-Gahot, Maxime Dénès, Gabriel Dulac-Arnold, Sertan Girgin, François Husson, Valentin Iovene, Julie Josse, Antoine Kimmoun, François Landes, Jean-Pierre Nadal, Romain Primet, Frederico Quintao, Pierre Guillaume Raverdy, Vincent Rouvreau, Olivier Teboul, Roman Yurchak
Statistique et Société
13   Affinity maturation for an optimal balance between long-term immune coverage and short-term resource constraints
 Victor Chardès, Massimo Vergassola, Aleksandra Walczak, Thierry Mora
Proceedings of the National Academy of Sciences of the United States of America
14   Categorical Perception: A Groundwork for Deep Learning
 Laurent Bonnasse-Gahot, Jean-Pierre Nadal
Neural Computation
15   Confidence-controlled Hebbian learning efficiently extracts category membership from stimuli encoded in view of a categorization task
 Kevin Berlemont, Jean-Pierre Nadal
Neural Computation

2021

16   Fluid mechanics of free subduction on a sphere. Part 1. The axisymmetric case
 Alexander Chamolly, Neil M. Ribe
Journal of Fluid Mechanics
17   Modeling the mechanics of growing epithelia with a bilayer plate theory
 Joseph Ackermann, Paul-Qiuyang Qu, Loïc Le Goff, Martine Ben Amar
The European Physical Journal Plus
18   Machine learning and computational modeling approaches towards detection of pathological activity markers in the cortex
 Ivan Lazarevich
-THESE-
19   Geometry of Gene Regulatory Dynamics
 David A Rand, Archishman Raju, Meritxell Sáez, Francis Corson, Eric D Siggia
Proceedings of the National Academy of Sciences of the United States of America
20   Origin of gradients in lipid density and surface tension between connected lipid droplet and bilayer
 Abdou Rachid Thiam, Aymeric Chorlay, Lionel Forêt
Biophysical Journal
21   Human Inference in Changing Environments with Temporal Structure
 Arthur Prat-Carrabin, Robert Wilson, Jonathan Cohen, Rava Azeredo da Silveira
Psychological Review
22   Biases and Variability from Costly Bayesian Inference
 Arthur Prat-Carrabin, Florent Meyniel, Misha Tsodyks, Rava Azeredo da Silveira
Entropy
23   Reciprocal stabilization of glycine receptors and gephyrin scaffold proteins at inhibitory synapses
 Thomas Chapdelaine, Vincent Hakim, Antoine Triller, Jonas Ranft, Christian G Specht
Biophysical Journal
24   Fat inclusions strongly alter membrane mechanics
 Alexandre Santinho, Aymeric Chorlay, Lionel Foret, Abdou Rachid Thiam
Biophysical Journal

2020

25   Synchronization, stochasticity and phase waves in neuronal networks with spatially-structured connectivity
 Anirudh Kulkarni, Jonas Ranft, Vincent Hakim
Frontiers in Computational Neuroscience
26   Tissue-wide coordination of epithelium-to-neural stem cell transition in the Drosophila optic lobe requires Neuralized
 Chloé Shard, Juan Luna-Escalante, François Schweisguth
Journal of Cell Biology
27   From neural coding to decision-making
 Kevin Berlemont
-THESE-
28   Cholinergic switch between two types of slow waves in cerebral cortex
 Trang-Anh E. Nghiem, Núria Tort-Colet, Tomasz Gorski, Ulisse Ferrari, Shayan Moghimyfiroozabad, Jennifer S. Goldman, Bartosz Telenczuk, Cristiano Capone, Thierry Bal, Matteo Di Volo, Alain Destexhe
Cerebral Cortex
29   Nonlinear neural network dynamics accounts for human confidence in a sequence of perceptual decisions
 Kevin Berlemont, Jean-Remy Martin, Jérôme Sackur, Jean-Pierre Nadal
Scientific Reports
30   Scaling laws and snap-through events in indentation of perforated membranes
 Fei Jia, Martine Ben Amar
Journal of the Mechanics and Physics of Solids
31   A tensile ring drives tissue flows to shape the gastrulating amniote embryo
 Mehdi Saadaoui, Didier Rocancourt, Julian Roussel, Francis Corson, Jerome Gros
Science
32   From growing bubbles and dendrites to biological forms
 Vincent Hakim
Comptes Rendus. Mécanique
33   Tribute to an exemplary man: Yves Couder
 Martine Ben Amar, Laurent Limat, Olivier Pouliquen, Emmanuel Villermaux
Comptes Rendus. Mécanique
34   Tip growth in morpho-elasticity
 Martine Ben Amar, Julien Dervaux
Comptes Rendus. Mécanique
35   Lifetime of a structure evolving by cluster aggregation and particle loss, and application to postsynaptic scaffold domains
 Vincent Hakim, Jonas Ranft
Physical Review E
36   The geometry of information coding in correlated neural populations
 Rava Azeredo da Silveira, Fred Rieke
Annual Review of Neuroscience

2019

37   Modeling morphogenesis on epithelial tissues : from forces to geometry and back
 Diego Contreras
-THESE-
38   Bridging single neuron dynamics to global brain states
 Jennifer S Goldman, Núria Tort-Colet, Matteo Di Volo, Eduarda Susin, Jules Bouté, Mélissa Dali, Mallory Carlu, Trang-Anh Nghiem, Tomasz Gorski, Alain Destexhe
Frontiers in Systems Neuroscience
39   Regulation of Notch output dynamics via specific E(spl)-HLH factors during bristle patterning in Drosophila
 Lydie Couturier, Khalil Mazouni, Francis Corson, François Schweisguth
Nature Communications
40   Chemotaxis as a navigation strategy to boost range expansion
 Jonas Cremer, Tomoya Honda, Ying Tang, Jerome Wong-Ng, Massimo Vergassola, Terence Hwa
Nature
41   Progressive recruitment of distal MEC-4 channels determines touch response strength in C. elegans
 Samata Katta, Alessandro Sanzeni, Alakananda Das, Massimo Vergassola, Miriam Goodman
Journal of General Physiology
42   Growth and remodelling of living tissues: perspectives, challenges and opportunities
 Davide Ambrosi, Martine Ben Amar, Christian Cyron, Antonio Desimone, Alain Goriely, Jay Humphrey, Ellen Kuhl
Journal of the Royal Society Interface
43   Self-Organization in Pattern Formation
 François Schweisguth, Francis Corson
Developmental Cell
44   Noisy Memory and Over-Reaction to News
 Rava Azeredo da Silveira, Michael Woodford
American Economic Association Papers and Proceedings
45   Self-Organized Nuclear Positioning Synchronizes the Cell Cycle in Drosophila Embryos
 Victoria Deneke, Alberto Puliafito, Daniel Krueger, Avaneesh Narla, Alessandro de Simone, Luca Primo, Massimo Vergassola, Stefano de Renzis, Stefano Di Talia
Cell
46   Residential income segregation: A behavioral model of the housing market
 Marco Pangallo, Jean-Pierre Nadal, Annick Vignes
Journal of Economic Behavior and Organization
47   Functional Diversity in the Retina Improves the Population Code
 Michael Berry Ii, Felix Lebois, Avi Ziskind, Rava Azeredo da Silveira
Neural Computation
48   Perceptual decision making: Biases in post-error reaction times explained by attractor network dynamics
 Kevin Berlemont, Jean-Pierre Nadal
Journal of Neuroscience
49   Glutamate spillover in C. elegans triggers repetitive behavior through presynaptic activation of MGL-2/mGluR5
 Menachem Katz, Francis Corson, Wolfgang Keil, Anupriya Singhal, Andrea Bae, Yun Lu, Yupu Liang, Shai Shaham
Nature Communications
50   SNARE Machinery is optimized for ultra-fast fusion
 Fabio Manca, Frédéric Pincet, Lev Truskinovsky, James E Rothman, Lionel Foret, Matthieu Caruel
Proceedings of the National Academy of Sciences of the United States of America
52
Publications
5
Années